Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm1E9Q9Q2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.1■■□□□ 1.29
R3hdm1E9Q9Q2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm1E9Q9Q2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
R3hdm1E9Q9Q2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.1■■□□□ 1.29
R3hdm1E9Q9Q2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm1E9Q9Q2 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.1■■□□□ 1.29
R3hdm1E9Q9Q2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm1E9Q9Q2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm1E9Q9Q2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm1E9Q9Q2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm1E9Q9Q2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm1E9Q9Q2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm1E9Q9Q2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm1E9Q9Q2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.09■■□□□ 1.29
R3hdm1E9Q9Q2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm1E9Q9Q2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm1E9Q9Q2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
R3hdm1E9Q9Q2 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.08■■□□□ 1.29
R3hdm1E9Q9Q2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
R3hdm1E9Q9Q2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.08■■□□□ 1.29
R3hdm1E9Q9Q2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
R3hdm1E9Q9Q2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
R3hdm1E9Q9Q2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
R3hdm1E9Q9Q2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.07■■□□□ 1.28
R3hdm1E9Q9Q2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
R3hdm1E9Q9Q2 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.07■■□□□ 1.28
R3hdm1E9Q9Q2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
R3hdm1E9Q9Q2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
R3hdm1E9Q9Q2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
R3hdm1E9Q9Q2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
R3hdm1E9Q9Q2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
R3hdm1E9Q9Q2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
R3hdm1E9Q9Q2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
R3hdm1E9Q9Q2 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.06■■□□□ 1.28
R3hdm1E9Q9Q2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.05■■□□□ 1.28
R3hdm1E9Q9Q2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3hdm1E9Q9Q2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.05■■□□□ 1.28
R3hdm1E9Q9Q2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3hdm1E9Q9Q2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3hdm1E9Q9Q2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3hdm1E9Q9Q2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.05■■□□□ 1.28
R3hdm1E9Q9Q2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.05■■□□□ 1.28
R3hdm1E9Q9Q2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3hdm1E9Q9Q2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
R3hdm1E9Q9Q2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
R3hdm1E9Q9Q2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.04■■□□□ 1.28
R3hdm1E9Q9Q2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
R3hdm1E9Q9Q2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
R3hdm1E9Q9Q2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3hdm1E9Q9Q2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
R3hdm1E9Q9Q2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3hdm1E9Q9Q2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
R3hdm1E9Q9Q2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3hdm1E9Q9Q2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
R3hdm1E9Q9Q2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3hdm1E9Q9Q2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3hdm1E9Q9Q2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
R3hdm1E9Q9Q2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3hdm1E9Q9Q2 Gm6139-201ENSMUST00000079261 882 ntBASIC23.02■■□□□ 1.28
R3hdm1E9Q9Q2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.02■■□□□ 1.28
R3hdm1E9Q9Q2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
R3hdm1E9Q9Q2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3hdm1E9Q9Q2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
R3hdm1E9Q9Q2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm1E9Q9Q2 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.01■■□□□ 1.27
R3hdm1E9Q9Q2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm1E9Q9Q2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm1E9Q9Q2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
R3hdm1E9Q9Q2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm1E9Q9Q2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.01■■□□□ 1.27
R3hdm1E9Q9Q2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
R3hdm1E9Q9Q2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23■■□□□ 1.27
R3hdm1E9Q9Q2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23■■□□□ 1.27
R3hdm1E9Q9Q2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
R3hdm1E9Q9Q2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
R3hdm1E9Q9Q2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
R3hdm1E9Q9Q2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
R3hdm1E9Q9Q2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.99■■□□□ 1.27
R3hdm1E9Q9Q2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
R3hdm1E9Q9Q2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.99■■□□□ 1.27
R3hdm1E9Q9Q2 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.99■■□□□ 1.27
R3hdm1E9Q9Q2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
R3hdm1E9Q9Q2 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.99■■□□□ 1.27
R3hdm1E9Q9Q2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
R3hdm1E9Q9Q2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
R3hdm1E9Q9Q2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
R3hdm1E9Q9Q2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.98■■□□□ 1.27
R3hdm1E9Q9Q2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
R3hdm1E9Q9Q2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
R3hdm1E9Q9Q2 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.98■■□□□ 1.27
R3hdm1E9Q9Q2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
R3hdm1E9Q9Q2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
R3hdm1E9Q9Q2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
R3hdm1E9Q9Q2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
R3hdm1E9Q9Q2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
R3hdm1E9Q9Q2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
R3hdm1E9Q9Q2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
R3hdm1E9Q9Q2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
R3hdm1E9Q9Q2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms