Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cntnap3E9PY62 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Cntnap3E9PY62 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.35■■□□□ 1.33
Cntnap3E9PY62 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Cntnap3E9PY62 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
Cntnap3E9PY62 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cntnap3E9PY62 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cntnap3E9PY62 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cntnap3E9PY62 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.34■■□□□ 1.33
Cntnap3E9PY62 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Cntnap3E9PY62 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Cntnap3E9PY62 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cntnap3E9PY62 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cntnap3E9PY62 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cntnap3E9PY62 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cntnap3E9PY62 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.33■■□□□ 1.33
Cntnap3E9PY62 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cntnap3E9PY62 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.33■■□□□ 1.33
Cntnap3E9PY62 Gm18671-201ENSMUST00000214826 683 ntBASIC23.33■■□□□ 1.33
Cntnap3E9PY62 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.33■■□□□ 1.32
Cntnap3E9PY62 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Cntnap3E9PY62 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cntnap3E9PY62 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Cntnap3E9PY62 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC23.32■■□□□ 1.32
Cntnap3E9PY62 Nespas-201ENSMUST00000143738 1083 ntBASIC23.31■■□□□ 1.32
Cntnap3E9PY62 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.31■■□□□ 1.32
Cntnap3E9PY62 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cntnap3E9PY62 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cntnap3E9PY62 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cntnap3E9PY62 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cntnap3E9PY62 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC23.3■■□□□ 1.32
Cntnap3E9PY62 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cntnap3E9PY62 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cntnap3E9PY62 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cntnap3E9PY62 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cntnap3E9PY62 AV356131-201ENSMUST00000206201 750 ntBASIC23.29■■□□□ 1.32
Cntnap3E9PY62 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.29■■□□□ 1.32
Cntnap3E9PY62 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cntnap3E9PY62 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cntnap3E9PY62 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cntnap3E9PY62 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Cntnap3E9PY62 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.28■■□□□ 1.32
Cntnap3E9PY62 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cntnap3E9PY62 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cntnap3E9PY62 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cntnap3E9PY62 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cntnap3E9PY62 Gm10252-201ENSMUST00000209541 832 ntBASIC23.27■■□□□ 1.32
Cntnap3E9PY62 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cntnap3E9PY62 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cntnap3E9PY62 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cntnap3E9PY62 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cntnap3E9PY62 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.26■■□□□ 1.31
Cntnap3E9PY62 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cntnap3E9PY62 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cntnap3E9PY62 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cntnap3E9PY62 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cntnap3E9PY62 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap3E9PY62 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap3E9PY62 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap3E9PY62 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.25■■□□□ 1.31
Cntnap3E9PY62 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.25■■□□□ 1.31
Cntnap3E9PY62 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap3E9PY62 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap3E9PY62 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap3E9PY62 Gm10033-202ENSMUST00000211874 928 ntBASIC23.24■■□□□ 1.31
Cntnap3E9PY62 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap3E9PY62 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap3E9PY62 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap3E9PY62 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap3E9PY62 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap3E9PY62 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap3E9PY62 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap3E9PY62 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap3E9PY62 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap3E9PY62 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap3E9PY62 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap3E9PY62 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap3E9PY62 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Cntnap3E9PY62 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap3E9PY62 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap3E9PY62 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap3E9PY62 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
Cntnap3E9PY62 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.22■■□□□ 1.31
Cntnap3E9PY62 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap3E9PY62 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap3E9PY62 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cntnap3E9PY62 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cntnap3E9PY62 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.21■■□□□ 1.31
Cntnap3E9PY62 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cntnap3E9PY62 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.21■■□□□ 1.31
Cntnap3E9PY62 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
Cntnap3E9PY62 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap3E9PY62 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Cntnap3E9PY62 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.2■■□□□ 1.3
Cntnap3E9PY62 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap3E9PY62 Mir7071-201ENSMUST00000184847 69 ntBASIC23.2■■□□□ 1.3
Cntnap3E9PY62 Gm40848-201ENSMUST00000221998 324 ntBASIC23.2■■□□□ 1.3
Cntnap3E9PY62 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cntnap3E9PY62 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cntnap3E9PY62 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms