Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Gm28043E0CXC2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28043E0CXC2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Gm28043E0CXC2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Gm28043E0CXC2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28043E0CXC2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28043E0CXC2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28043E0CXC2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28043E0CXC2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm28043E0CXC2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28043E0CXC2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28043E0CXC2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28043E0CXC2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28043E0CXC2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Gm28043E0CXC2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm28043E0CXC2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm28043E0CXC2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm28043E0CXC2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm28043E0CXC2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.77■□□□□ 0.92
Gm28043E0CXC2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.76■□□□□ 0.91
Gm28043E0CXC2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.76■□□□□ 0.91
Gm28043E0CXC2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28043E0CXC2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.76■□□□□ 0.91
Gm28043E0CXC2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28043E0CXC2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.76■□□□□ 0.91
Gm28043E0CXC2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.76■□□□□ 0.91
Gm28043E0CXC2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28043E0CXC2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28043E0CXC2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28043E0CXC2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28043E0CXC2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Gm28043E0CXC2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28043E0CXC2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28043E0CXC2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.75■□□□□ 0.91
Gm28043E0CXC2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28043E0CXC2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Gm28043E0CXC2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28043E0CXC2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.75■□□□□ 0.91
Gm28043E0CXC2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28043E0CXC2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28043E0CXC2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28043E0CXC2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28043E0CXC2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28043E0CXC2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28043E0CXC2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.74■□□□□ 0.91
Gm28043E0CXC2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28043E0CXC2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28043E0CXC2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28043E0CXC2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Gm28043E0CXC2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Gm28043E0CXC2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28043E0CXC2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Gm28043E0CXC2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28043E0CXC2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Gm28043E0CXC2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28043E0CXC2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28043E0CXC2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28043E0CXC2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28043E0CXC2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28043E0CXC2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm28043E0CXC2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28043E0CXC2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm28043E0CXC2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Gm28043E0CXC2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28043E0CXC2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28043E0CXC2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Gm28043E0CXC2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28043E0CXC2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28043E0CXC2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28043E0CXC2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28043E0CXC2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28043E0CXC2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28043E0CXC2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28043E0CXC2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28043E0CXC2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28043E0CXC2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28043E0CXC2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28043E0CXC2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28043E0CXC2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Gm28043E0CXC2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28043E0CXC2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28043E0CXC2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Gm28043E0CXC2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Gm28043E0CXC2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28043E0CXC2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28043E0CXC2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Gm28043E0CXC2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.68■□□□□ 0.9
Gm28043E0CXC2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.68■□□□□ 0.9
Gm28043E0CXC2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28043E0CXC2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28043E0CXC2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28043E0CXC2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms