Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3543D3Z235 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3543D3Z235 Gm14117-201ENSMUST00000122417 843 ntBASIC18.84■□□□□ 0.61
Gm3543D3Z235 Etf1-202ENSMUST00000180351 108 ntBASIC18.84■□□□□ 0.61
Gm3543D3Z235 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.84■□□□□ 0.61
Gm3543D3Z235 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3543D3Z235 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Gm3543D3Z235 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.84■□□□□ 0.61
Gm3543D3Z235 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Gm3543D3Z235 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3543D3Z235 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.84■□□□□ 0.61
Gm3543D3Z235 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3543D3Z235 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3543D3Z235 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Gm3543D3Z235 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.83■□□□□ 0.6
Gm3543D3Z235 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3543D3Z235 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Gm3543D3Z235 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Gm3543D3Z235 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gm3543D3Z235 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3543D3Z235 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
Gm3543D3Z235 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3543D3Z235 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3543D3Z235 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3543D3Z235 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm3543D3Z235 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.82■□□□□ 0.6
Gm3543D3Z235 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3543D3Z235 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm3543D3Z235 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3543D3Z235 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.82■□□□□ 0.6
Gm3543D3Z235 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3543D3Z235 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3543D3Z235 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3543D3Z235 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3543D3Z235 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm3543D3Z235 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.81■□□□□ 0.6
Gm3543D3Z235 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3543D3Z235 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gm3543D3Z235 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3543D3Z235 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gm3543D3Z235 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3543D3Z235 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3543D3Z235 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3543D3Z235 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3543D3Z235 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3543D3Z235 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3543D3Z235 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3543D3Z235 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.8■□□□□ 0.6
Gm3543D3Z235 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3543D3Z235 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.8■□□□□ 0.6
Gm3543D3Z235 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.79■□□□□ 0.6
Gm3543D3Z235 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3543D3Z235 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.78■□□□□ 0.6
Gm3543D3Z235 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.78■□□□□ 0.6
Gm3543D3Z235 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3543D3Z235 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gm3543D3Z235 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3543D3Z235 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Gm3543D3Z235 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3543D3Z235 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3543D3Z235 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3543D3Z235 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3543D3Z235 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3543D3Z235 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.77■□□□□ 0.6
Gm3543D3Z235 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Gm3543D3Z235 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm3543D3Z235 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3543D3Z235 Gm7417-201ENSMUST00000192950 473 ntBASIC18.76■□□□□ 0.59
Gm3543D3Z235 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.76■□□□□ 0.59
Gm3543D3Z235 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3543D3Z235 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3543D3Z235 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.76■□□□□ 0.59
Gm3543D3Z235 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3543D3Z235 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3543D3Z235 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.75■□□□□ 0.59
Gm3543D3Z235 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.75■□□□□ 0.59
Gm3543D3Z235 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.75■□□□□ 0.59
Gm3543D3Z235 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Gm3543D3Z235 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gm3543D3Z235 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm3543D3Z235 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3543D3Z235 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3543D3Z235 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3543D3Z235 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3543D3Z235 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3543D3Z235 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.74■□□□□ 0.59
Gm3543D3Z235 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm3543D3Z235 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms