Protein–RNA interactions for Protein: B8JJN0

Gm20547, Predicted gene 20547, mousemouse

Predictions only

Length 1,276 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20547B8JJN0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm20547B8JJN0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm20547B8JJN0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.05■□□□□ 0.8
Gm20547B8JJN0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Gm20547B8JJN0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm20547B8JJN0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm20547B8JJN0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Gm20547B8JJN0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.04■□□□□ 0.8
Gm20547B8JJN0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm20547B8JJN0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Gm20547B8JJN0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.04■□□□□ 0.8
Gm20547B8JJN0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm20547B8JJN0 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.04■□□□□ 0.8
Gm20547B8JJN0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm20547B8JJN0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm20547B8JJN0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm20547B8JJN0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.03■□□□□ 0.8
Gm20547B8JJN0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm20547B8JJN0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm20547B8JJN0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm20547B8JJN0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.03■□□□□ 0.8
Gm20547B8JJN0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Gm20547B8JJN0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm20547B8JJN0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.03■□□□□ 0.8
Gm20547B8JJN0 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.02■□□□□ 0.8
Gm20547B8JJN0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.02■□□□□ 0.8
Gm20547B8JJN0 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.02■□□□□ 0.8
Gm20547B8JJN0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.02■□□□□ 0.8
Gm20547B8JJN0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.02■□□□□ 0.8
Gm20547B8JJN0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm20547B8JJN0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm20547B8JJN0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm20547B8JJN0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Gm20547B8JJN0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Gm20547B8JJN0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm20547B8JJN0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gm20547B8JJN0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Gm20547B8JJN0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Gm20547B8JJN0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm20547B8JJN0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.01■□□□□ 0.79
Gm20547B8JJN0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm20547B8JJN0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gm20547B8JJN0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Gm20547B8JJN0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm20547B8JJN0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm20547B8JJN0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20■□□□□ 0.79
Gm20547B8JJN0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm20547B8JJN0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.99■□□□□ 0.79
Gm20547B8JJN0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm20547B8JJN0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.99■□□□□ 0.79
Gm20547B8JJN0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.99■□□□□ 0.79
Gm20547B8JJN0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.99■□□□□ 0.79
Gm20547B8JJN0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm20547B8JJN0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm20547B8JJN0 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.99■□□□□ 0.79
Gm20547B8JJN0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Gm20547B8JJN0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm20547B8JJN0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Gm20547B8JJN0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Gm20547B8JJN0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm20547B8JJN0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.98■□□□□ 0.79
Gm20547B8JJN0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm20547B8JJN0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm20547B8JJN0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm20547B8JJN0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm20547B8JJN0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm20547B8JJN0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm20547B8JJN0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm20547B8JJN0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm20547B8JJN0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Gm20547B8JJN0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm20547B8JJN0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm20547B8JJN0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.96■□□□□ 0.79
Gm20547B8JJN0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.96■□□□□ 0.79
Gm20547B8JJN0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm20547B8JJN0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm20547B8JJN0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm20547B8JJN0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.94■□□□□ 0.78
Gm20547B8JJN0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm20547B8JJN0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm20547B8JJN0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm20547B8JJN0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm20547B8JJN0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm20547B8JJN0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Gm20547B8JJN0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm20547B8JJN0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Gm20547B8JJN0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms