Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Phf11cB4XVP9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Phf11cB4XVP9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Phf11cB4XVP9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Phf11cB4XVP9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phf11cB4XVP9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Phf11cB4XVP9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phf11cB4XVP9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Phf11cB4XVP9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Phf11cB4XVP9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Phf11cB4XVP9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phf11cB4XVP9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phf11cB4XVP9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phf11cB4XVP9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phf11cB4XVP9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phf11cB4XVP9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.74■□□□□ 0.75
Phf11cB4XVP9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Phf11cB4XVP9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.74■□□□□ 0.75
Phf11cB4XVP9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phf11cB4XVP9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Phf11cB4XVP9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phf11cB4XVP9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phf11cB4XVP9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Phf11cB4XVP9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Phf11cB4XVP9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phf11cB4XVP9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.73■□□□□ 0.75
Phf11cB4XVP9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phf11cB4XVP9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phf11cB4XVP9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.73■□□□□ 0.75
Phf11cB4XVP9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phf11cB4XVP9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phf11cB4XVP9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phf11cB4XVP9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Phf11cB4XVP9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Phf11cB4XVP9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Phf11cB4XVP9 Notumos-201ENSMUST00000151998 2659 ntBASIC19.71■□□□□ 0.75
Phf11cB4XVP9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phf11cB4XVP9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phf11cB4XVP9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phf11cB4XVP9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Phf11cB4XVP9 Gm14523-201ENSMUST00000117260 558 ntBASIC19.71■□□□□ 0.75
Phf11cB4XVP9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phf11cB4XVP9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.71■□□□□ 0.75
Phf11cB4XVP9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Phf11cB4XVP9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Phf11cB4XVP9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phf11cB4XVP9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.7■□□□□ 0.74
Phf11cB4XVP9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Phf11cB4XVP9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Phf11cB4XVP9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Phf11cB4XVP9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
Phf11cB4XVP9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Phf11cB4XVP9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Phf11cB4XVP9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Phf11cB4XVP9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.7■□□□□ 0.74
Phf11cB4XVP9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phf11cB4XVP9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Phf11cB4XVP9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phf11cB4XVP9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.69■□□□□ 0.74
Phf11cB4XVP9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Phf11cB4XVP9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phf11cB4XVP9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phf11cB4XVP9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phf11cB4XVP9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Phf11cB4XVP9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phf11cB4XVP9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Phf11cB4XVP9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Phf11cB4XVP9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Phf11cB4XVP9 Gm7332-201ENSMUST00000118351 454 ntBASIC19.68■□□□□ 0.74
Phf11cB4XVP9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.68■□□□□ 0.74
Phf11cB4XVP9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.68■□□□□ 0.74
Phf11cB4XVP9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.68■□□□□ 0.74
Phf11cB4XVP9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Phf11cB4XVP9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Phf11cB4XVP9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.67■□□□□ 0.74
Phf11cB4XVP9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Phf11cB4XVP9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Phf11cB4XVP9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Phf11cB4XVP9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Phf11cB4XVP9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phf11cB4XVP9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Phf11cB4XVP9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Phf11cB4XVP9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phf11cB4XVP9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Phf11cB4XVP9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phf11cB4XVP9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Phf11cB4XVP9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phf11cB4XVP9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phf11cB4XVP9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phf11cB4XVP9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Phf11cB4XVP9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Phf11cB4XVP9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Phf11cB4XVP9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Phf11cB4XVP9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Phf11cB4XVP9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Phf11cB4XVP9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Phf11cB4XVP9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Phf11cB4XVP9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Phf11cB4XVP9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Phf11cB4XVP9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms