Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm11127A7VMS2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm11127A7VMS2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm11127A7VMS2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Gm11127A7VMS2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.36■□□□□ 0.53
Gm11127A7VMS2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm11127A7VMS2 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.36■□□□□ 0.53
Gm11127A7VMS2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm11127A7VMS2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm11127A7VMS2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm11127A7VMS2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm11127A7VMS2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm11127A7VMS2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm11127A7VMS2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm11127A7VMS2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.35■□□□□ 0.53
Gm11127A7VMS2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.35■□□□□ 0.53
Gm11127A7VMS2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm11127A7VMS2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm11127A7VMS2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm11127A7VMS2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gm11127A7VMS2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm11127A7VMS2 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.35■□□□□ 0.53
Gm11127A7VMS2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gm11127A7VMS2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Gm11127A7VMS2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm11127A7VMS2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm11127A7VMS2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm11127A7VMS2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm11127A7VMS2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm11127A7VMS2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm11127A7VMS2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm11127A7VMS2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm11127A7VMS2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm11127A7VMS2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm11127A7VMS2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm11127A7VMS2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.33■□□□□ 0.52
Gm11127A7VMS2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm11127A7VMS2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm11127A7VMS2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm11127A7VMS2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm11127A7VMS2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm11127A7VMS2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm11127A7VMS2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm11127A7VMS2 Gm22567-201ENSMUST00000175542 342 ntBASIC18.32■□□□□ 0.52
Gm11127A7VMS2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm11127A7VMS2 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.32■□□□□ 0.52
Gm11127A7VMS2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Gm11127A7VMS2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm11127A7VMS2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11127A7VMS2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11127A7VMS2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11127A7VMS2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.31■□□□□ 0.52
Gm11127A7VMS2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gm11127A7VMS2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11127A7VMS2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11127A7VMS2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Gm11127A7VMS2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11127A7VMS2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm11127A7VMS2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm11127A7VMS2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm11127A7VMS2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Gm11127A7VMS2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm11127A7VMS2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11127A7VMS2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.29■□□□□ 0.52
Gm11127A7VMS2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11127A7VMS2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11127A7VMS2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11127A7VMS2 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.29■□□□□ 0.52
Gm11127A7VMS2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11127A7VMS2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11127A7VMS2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11127A7VMS2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11127A7VMS2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.28■□□□□ 0.52
Gm11127A7VMS2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.28■□□□□ 0.52
Gm11127A7VMS2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11127A7VMS2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11127A7VMS2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11127A7VMS2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11127A7VMS2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11127A7VMS2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Gm11127A7VMS2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11127A7VMS2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11127A7VMS2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm11127A7VMS2 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.26■□□□□ 0.51
Gm11127A7VMS2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11127A7VMS2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11127A7VMS2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11127A7VMS2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms