Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12-1A0N8R1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.45■□□□□ 0.38
Trav12-1A0N8R1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12-1A0N8R1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trav12-1A0N8R1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Trav12-1A0N8R1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12-1A0N8R1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav12-1A0N8R1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.45■□□□□ 0.38
Trav12-1A0N8R1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav12-1A0N8R1 Notumos-201ENSMUST00000151998 2659 ntBASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Gm14523-201ENSMUST00000117260 558 ntBASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-1A0N8R1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-1A0N8R1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-1A0N8R1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-1A0N8R1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-1A0N8R1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-1A0N8R1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-1A0N8R1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-1A0N8R1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Trav12-1A0N8R1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-1A0N8R1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trav12-1A0N8R1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12-1A0N8R1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12-1A0N8R1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12-1A0N8R1 Gm27502-201ENSMUST00000183495 199 ntBASIC17.4■□□□□ 0.38
Trav12-1A0N8R1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12-1A0N8R1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav12-1A0N8R1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12-1A0N8R1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Trav12-1A0N8R1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.38
Trav12-1A0N8R1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Trav12-1A0N8R1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav12-1A0N8R1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav12-1A0N8R1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav12-1A0N8R1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12-1A0N8R1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12-1A0N8R1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trav12-1A0N8R1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Trav12-1A0N8R1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12-1A0N8R1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav12-1A0N8R1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav12-1A0N8R1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12-1A0N8R1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12-1A0N8R1 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.38■□□□□ 0.37
Trav12-1A0N8R1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12-1A0N8R1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav12-1A0N8R1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12-1A0N8R1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12-1A0N8R1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12-1A0N8R1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12-1A0N8R1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12-1A0N8R1 Gm7332-201ENSMUST00000118351 454 ntBASIC17.37■□□□□ 0.37
Trav12-1A0N8R1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.37■□□□□ 0.37
Trav12-1A0N8R1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12-1A0N8R1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12-1A0N8R1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav12-1A0N8R1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12-1A0N8R1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12-1A0N8R1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav12-1A0N8R1 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.36■□□□□ 0.37
Trav12-1A0N8R1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12-1A0N8R1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms