Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-4A0A0G2JG01 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trav13n-4A0A0G2JG01 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-4A0A0G2JG01 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-4A0A0G2JG01 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.84■□□□□ 0.29
Trav13n-4A0A0G2JG01 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13n-4A0A0G2JG01 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13n-4A0A0G2JG01 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13n-4A0A0G2JG01 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13n-4A0A0G2JG01 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13n-4A0A0G2JG01 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav13n-4A0A0G2JG01 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13n-4A0A0G2JG01 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Trav13n-4A0A0G2JG01 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trav13n-4A0A0G2JG01 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13n-4A0A0G2JG01 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Trav13n-4A0A0G2JG01 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav13n-4A0A0G2JG01 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13n-4A0A0G2JG01 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13n-4A0A0G2JG01 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Trav13n-4A0A0G2JG01 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13n-4A0A0G2JG01 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13n-4A0A0G2JG01 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Etf1-202ENSMUST00000180351 108 ntBASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-4A0A0G2JG01 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13n-4A0A0G2JG01 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13n-4A0A0G2JG01 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav13n-4A0A0G2JG01 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13n-4A0A0G2JG01 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Trav13n-4A0A0G2JG01 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13n-4A0A0G2JG01 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13n-4A0A0G2JG01 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13n-4A0A0G2JG01 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13n-4A0A0G2JG01 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13n-4A0A0G2JG01 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13n-4A0A0G2JG01 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav13n-4A0A0G2JG01 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trav13n-4A0A0G2JG01 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13n-4A0A0G2JG01 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13n-4A0A0G2JG01 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav13n-4A0A0G2JG01 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13n-4A0A0G2JG01 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13n-4A0A0G2JG01 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav13n-4A0A0G2JG01 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav13n-4A0A0G2JG01 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13n-4A0A0G2JG01 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13n-4A0A0G2JG01 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Trav13n-4A0A0G2JG01 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13n-4A0A0G2JG01 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13n-4A0A0G2JG01 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13n-4A0A0G2JG01 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13n-4A0A0G2JG01 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Trav13n-4A0A0G2JG01 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav13n-4A0A0G2JG01 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav13n-4A0A0G2JG01 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13n-4A0A0G2JG01 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13n-4A0A0G2JG01 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav13n-4A0A0G2JG01 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav13n-4A0A0G2JG01 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13n-4A0A0G2JG01 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13n-4A0A0G2JG01 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13n-4A0A0G2JG01 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav13n-4A0A0G2JG01 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13n-4A0A0G2JG01 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13n-4A0A0G2JG01 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav13n-4A0A0G2JG01 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav13n-4A0A0G2JG01 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13n-4A0A0G2JG01 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav13n-4A0A0G2JG01 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav13n-4A0A0G2JG01 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13n-4A0A0G2JG01 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms