Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav19A0A0B4J1K4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trav19A0A0B4J1K4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav19A0A0B4J1K4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav19A0A0B4J1K4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav19A0A0B4J1K4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav19A0A0B4J1K4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav19A0A0B4J1K4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav19A0A0B4J1K4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav19A0A0B4J1K4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav19A0A0B4J1K4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav19A0A0B4J1K4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav19A0A0B4J1K4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav19A0A0B4J1K4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav19A0A0B4J1K4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav19A0A0B4J1K4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav19A0A0B4J1K4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav19A0A0B4J1K4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav19A0A0B4J1K4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav19A0A0B4J1K4 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.53■□□□□ 0.08
Trav19A0A0B4J1K4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav19A0A0B4J1K4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav19A0A0B4J1K4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav19A0A0B4J1K4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trav19A0A0B4J1K4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.53■□□□□ 0.08
Trav19A0A0B4J1K4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav19A0A0B4J1K4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav19A0A0B4J1K4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav19A0A0B4J1K4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav19A0A0B4J1K4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav19A0A0B4J1K4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav19A0A0B4J1K4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav19A0A0B4J1K4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav19A0A0B4J1K4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
Trav19A0A0B4J1K4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav19A0A0B4J1K4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav19A0A0B4J1K4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav19A0A0B4J1K4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav19A0A0B4J1K4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav19A0A0B4J1K4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav19A0A0B4J1K4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav19A0A0B4J1K4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav19A0A0B4J1K4 Gm9806-201ENSMUST00000051080 552 ntBASIC15.51■□□□□ 0.07
Trav19A0A0B4J1K4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Trav19A0A0B4J1K4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav19A0A0B4J1K4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav19A0A0B4J1K4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav19A0A0B4J1K4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms