Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv20A0A0B4J1H5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv20A0A0B4J1H5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv20A0A0B4J1H5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv20A0A0B4J1H5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trbv20A0A0B4J1H5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.73■□□□□ 0.59
Trbv20A0A0B4J1H5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv20A0A0B4J1H5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv20A0A0B4J1H5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv20A0A0B4J1H5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv20A0A0B4J1H5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.73■□□□□ 0.59
Trbv20A0A0B4J1H5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv20A0A0B4J1H5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv20A0A0B4J1H5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv20A0A0B4J1H5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv20A0A0B4J1H5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv20A0A0B4J1H5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv20A0A0B4J1H5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv20A0A0B4J1H5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv20A0A0B4J1H5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv20A0A0B4J1H5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv20A0A0B4J1H5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trbv20A0A0B4J1H5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Trbv20A0A0B4J1H5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.69■□□□□ 0.58
Trbv20A0A0B4J1H5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv20A0A0B4J1H5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv20A0A0B4J1H5 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.68■□□□□ 0.58
Trbv20A0A0B4J1H5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv20A0A0B4J1H5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv20A0A0B4J1H5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv20A0A0B4J1H5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv20A0A0B4J1H5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv20A0A0B4J1H5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv20A0A0B4J1H5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv20A0A0B4J1H5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv20A0A0B4J1H5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv20A0A0B4J1H5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv20A0A0B4J1H5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.66■□□□□ 0.58
Trbv20A0A0B4J1H5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv20A0A0B4J1H5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv20A0A0B4J1H5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv20A0A0B4J1H5 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.66■□□□□ 0.58
Trbv20A0A0B4J1H5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv20A0A0B4J1H5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trbv20A0A0B4J1H5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trbv20A0A0B4J1H5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Trbv20A0A0B4J1H5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv20A0A0B4J1H5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv20A0A0B4J1H5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trbv20A0A0B4J1H5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv20A0A0B4J1H5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trbv20A0A0B4J1H5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv20A0A0B4J1H5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms