Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv5A0A0B4J1G9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.76■□□□□ 0.27
Trbv5A0A0B4J1G9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv5A0A0B4J1G9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Trbv5A0A0B4J1G9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv5A0A0B4J1G9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv5A0A0B4J1G9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv5A0A0B4J1G9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv5A0A0B4J1G9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Terc-201ENSMUST00000082862 423 ntBASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv5A0A0B4J1G9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.74■□□□□ 0.27
Trbv5A0A0B4J1G9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv5A0A0B4J1G9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trbv5A0A0B4J1G9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv5A0A0B4J1G9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv5A0A0B4J1G9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv5A0A0B4J1G9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv5A0A0B4J1G9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv5A0A0B4J1G9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv5A0A0B4J1G9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.74■□□□□ 0.27
Trbv5A0A0B4J1G9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trbv5A0A0B4J1G9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv5A0A0B4J1G9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv5A0A0B4J1G9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv5A0A0B4J1G9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv5A0A0B4J1G9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv5A0A0B4J1G9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv5A0A0B4J1G9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.71■□□□□ 0.27
Trbv5A0A0B4J1G9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trbv5A0A0B4J1G9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv5A0A0B4J1G9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv5A0A0B4J1G9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trbv5A0A0B4J1G9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trbv5A0A0B4J1G9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv5A0A0B4J1G9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv5A0A0B4J1G9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.7■□□□□ 0.26
Trbv5A0A0B4J1G9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv5A0A0B4J1G9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv5A0A0B4J1G9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.7■□□□□ 0.26
Trbv5A0A0B4J1G9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.7■□□□□ 0.26
Trbv5A0A0B4J1G9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trbv5A0A0B4J1G9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv5A0A0B4J1G9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv5A0A0B4J1G9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv5A0A0B4J1G9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.69■□□□□ 0.26
Trbv5A0A0B4J1G9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv5A0A0B4J1G9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv5A0A0B4J1G9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trbv5A0A0B4J1G9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.69■□□□□ 0.26
Trbv5A0A0B4J1G9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.69■□□□□ 0.26
Trbv5A0A0B4J1G9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv5A0A0B4J1G9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trbv5A0A0B4J1G9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv5A0A0B4J1G9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv5A0A0B4J1G9 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms