Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28778A0A087WSK7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28778A0A087WSK7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28778A0A087WSK7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Gm28778A0A087WSK7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28778A0A087WSK7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Gm28778A0A087WSK7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28778A0A087WSK7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28778A0A087WSK7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28778A0A087WSK7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28778A0A087WSK7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17■□□□□ 0.31
Gm28778A0A087WSK7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Gm5131-201ENSMUST00000212776 1238 ntBASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Gm40881-201ENSMUST00000223397 166 ntBASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Gm32051-202ENSMUST00000197905 2385 ntBASIC17■□□□□ 0.31
Gm28778A0A087WSK7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28778A0A087WSK7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28778A0A087WSK7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28778A0A087WSK7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Gm28778A0A087WSK7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28778A0A087WSK7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28778A0A087WSK7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28778A0A087WSK7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.99■□□□□ 0.31
Gm28778A0A087WSK7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28778A0A087WSK7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.97■□□□□ 0.31
Gm28778A0A087WSK7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.97■□□□□ 0.31
Gm28778A0A087WSK7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Gm28778A0A087WSK7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28778A0A087WSK7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28778A0A087WSK7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Gm28778A0A087WSK7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28778A0A087WSK7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Gm28778A0A087WSK7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28778A0A087WSK7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28778A0A087WSK7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28778A0A087WSK7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Gm28778A0A087WSK7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
Gm28778A0A087WSK7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Gm28778A0A087WSK7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.96■□□□□ 0.31
Gm28778A0A087WSK7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.96■□□□□ 0.31
Gm28778A0A087WSK7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28778A0A087WSK7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28778A0A087WSK7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28778A0A087WSK7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28778A0A087WSK7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Gm28778A0A087WSK7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28778A0A087WSK7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Gm28778A0A087WSK7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Gm28778A0A087WSK7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.94■□□□□ 0.3
Gm28778A0A087WSK7 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.94■□□□□ 0.3
Gm28778A0A087WSK7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28778A0A087WSK7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28778A0A087WSK7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28778A0A087WSK7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28778A0A087WSK7 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.93■□□□□ 0.3
Gm28778A0A087WSK7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28778A0A087WSK7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28778A0A087WSK7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.93■□□□□ 0.3
Gm28778A0A087WSK7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28778A0A087WSK7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28778A0A087WSK7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28778A0A087WSK7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28778A0A087WSK7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28778A0A087WSK7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Gm28778A0A087WSK7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28778A0A087WSK7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms