Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-6A0A075B6B2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6n-6A0A075B6B2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav6n-6A0A075B6B2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-6A0A075B6B2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-6A0A075B6B2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-6A0A075B6B2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-6A0A075B6B2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-6A0A075B6B2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-6A0A075B6B2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-6A0A075B6B2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-6A0A075B6B2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.4■□□□□ 0.06
Trav6n-6A0A075B6B2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6n-6A0A075B6B2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6n-6A0A075B6B2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Gm14523-201ENSMUST00000117260 558 ntBASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Gm12366-201ENSMUST00000121722 873 ntBASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Gm5786-201ENSMUST00000085368 882 ntBASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6n-6A0A075B6B2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav6n-6A0A075B6B2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-6A0A075B6B2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-6A0A075B6B2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-6A0A075B6B2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav6n-6A0A075B6B2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-6A0A075B6B2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-6A0A075B6B2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6n-6A0A075B6B2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav6n-6A0A075B6B2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav6n-6A0A075B6B2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-6A0A075B6B2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-6A0A075B6B2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Trav6n-6A0A075B6B2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.36■□□□□ 0.05
Trav6n-6A0A075B6B2 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.36■□□□□ 0.05
Trav6n-6A0A075B6B2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-6A0A075B6B2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-6A0A075B6B2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-6A0A075B6B2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms