Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav12d-3A0A075B6A4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trav12d-3A0A075B6A4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12d-3A0A075B6A4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav12d-3A0A075B6A4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav12d-3A0A075B6A4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav12d-3A0A075B6A4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Trav12d-3A0A075B6A4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12d-3A0A075B6A4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav12d-3A0A075B6A4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav12d-3A0A075B6A4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-3A0A075B6A4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-3A0A075B6A4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-3A0A075B6A4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-3A0A075B6A4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.63■□□□□ 0.09
Trav12d-3A0A075B6A4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav12d-3A0A075B6A4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-3A0A075B6A4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-3A0A075B6A4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12d-3A0A075B6A4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Trav12d-3A0A075B6A4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav12d-3A0A075B6A4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trav12d-3A0A075B6A4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-3A0A075B6A4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-3A0A075B6A4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.6■□□□□ 0.09
Trav12d-3A0A075B6A4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav12d-3A0A075B6A4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav12d-3A0A075B6A4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav12d-3A0A075B6A4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-3A0A075B6A4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-3A0A075B6A4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav12d-3A0A075B6A4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12d-3A0A075B6A4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav12d-3A0A075B6A4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12d-3A0A075B6A4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12d-3A0A075B6A4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12d-3A0A075B6A4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12d-3A0A075B6A4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12d-3A0A075B6A4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12d-3A0A075B6A4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12d-3A0A075B6A4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav12d-3A0A075B6A4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
Trav12d-3A0A075B6A4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-3A0A075B6A4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav12d-3A0A075B6A4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-3A0A075B6A4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-3A0A075B6A4 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.58■□□□□ 0.08
Trav12d-3A0A075B6A4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-3A0A075B6A4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-3A0A075B6A4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trav12d-3A0A075B6A4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav12d-3A0A075B6A4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-3A0A075B6A4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav12d-3A0A075B6A4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-3A0A075B6A4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-3A0A075B6A4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-3A0A075B6A4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-3A0A075B6A4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms