Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9d-1A0A075B699 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9d-1A0A075B699 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav9d-1A0A075B699 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
Trav9d-1A0A075B699 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9d-1A0A075B699 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9d-1A0A075B699 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9d-1A0A075B699 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9d-1A0A075B699 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav9d-1A0A075B699 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
Trav9d-1A0A075B699 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-1A0A075B699 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-1A0A075B699 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-1A0A075B699 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-1A0A075B699 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-1A0A075B699 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-1A0A075B699 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav9d-1A0A075B699 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav9d-1A0A075B699 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Trav9d-1A0A075B699 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9d-1A0A075B699 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav9d-1A0A075B699 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9d-1A0A075B699 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9d-1A0A075B699 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav9d-1A0A075B699 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav9d-1A0A075B699 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9d-1A0A075B699 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav9d-1A0A075B699 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-1A0A075B699 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-1A0A075B699 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Gm12366-201ENSMUST00000121722 873 ntBASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Gm5786-201ENSMUST00000085368 882 ntBASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav9d-1A0A075B699 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav9d-1A0A075B699 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9d-1A0A075B699 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav9d-1A0A075B699 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.02■□□□□ 0.16
Trav9d-1A0A075B699 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav9d-1A0A075B699 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9d-1A0A075B699 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9d-1A0A075B699 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9d-1A0A075B699 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav9d-1A0A075B699 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9d-1A0A075B699 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9d-1A0A075B699 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav9d-1A0A075B699 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9d-1A0A075B699 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.01■□□□□ 0.15
Trav9d-1A0A075B699 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9d-1A0A075B699 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9d-1A0A075B699 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9d-1A0A075B699 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-1A0A075B699 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav9d-1A0A075B699 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav9d-1A0A075B699 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-1A0A075B699 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-1A0A075B699 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-1A0A075B699 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms