Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav18A0A075B656 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav18A0A075B656 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav18A0A075B656 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav18A0A075B656 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav18A0A075B656 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav18A0A075B656 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav18A0A075B656 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav18A0A075B656 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav18A0A075B656 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav18A0A075B656 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.09■□□□□ 0.33
Trav18A0A075B656 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav18A0A075B656 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav18A0A075B656 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Trav18A0A075B656 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav18A0A075B656 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav18A0A075B656 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav18A0A075B656 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav18A0A075B656 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.07■□□□□ 0.32
Trav18A0A075B656 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav18A0A075B656 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav18A0A075B656 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav18A0A075B656 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav18A0A075B656 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav18A0A075B656 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.06■□□□□ 0.32
Trav18A0A075B656 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav18A0A075B656 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav18A0A075B656 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav18A0A075B656 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav18A0A075B656 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.05■□□□□ 0.32
Trav18A0A075B656 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav18A0A075B656 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.05■□□□□ 0.32
Trav18A0A075B656 Gm12366-201ENSMUST00000121722 873 ntBASIC17.05■□□□□ 0.32
Trav18A0A075B656 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav18A0A075B656 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.05■□□□□ 0.32
Trav18A0A075B656 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav18A0A075B656 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav18A0A075B656 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav18A0A075B656 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.05■□□□□ 0.32
Trav18A0A075B656 Gm5786-201ENSMUST00000085368 882 ntBASIC17.05■□□□□ 0.32
Trav18A0A075B656 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav18A0A075B656 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav18A0A075B656 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav18A0A075B656 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav18A0A075B656 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav18A0A075B656 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav18A0A075B656 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav18A0A075B656 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav18A0A075B656 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav18A0A075B656 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Trav18A0A075B656 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav18A0A075B656 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav18A0A075B656 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav18A0A075B656 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav18A0A075B656 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav18A0A075B656 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav18A0A075B656 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.03■□□□□ 0.32
Trav18A0A075B656 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav18A0A075B656 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav18A0A075B656 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav18A0A075B656 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav18A0A075B656 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav18A0A075B656 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav18A0A075B656 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav18A0A075B656 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav18A0A075B656 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav18A0A075B656 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav18A0A075B656 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav18A0A075B656 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav18A0A075B656 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav18A0A075B656 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav18A0A075B656 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trav18A0A075B656 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav18A0A075B656 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav18A0A075B656 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav18A0A075B656 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav18A0A075B656 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.01■□□□□ 0.31
Trav18A0A075B656 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav18A0A075B656 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav18A0A075B656 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav18A0A075B656 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav18A0A075B656 Gm10420-201ENSMUST00000121713 882 ntBASIC17.01■□□□□ 0.31
Trav18A0A075B656 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav18A0A075B656 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Trav18A0A075B656 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms