Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-4A0A075B654 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-4A0A075B654 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-4A0A075B654 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-4A0A075B654 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav3-4A0A075B654 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-4A0A075B654 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-4A0A075B654 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-4A0A075B654 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.02□□□□□ -0.16
Trav3-4A0A075B654 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-4A0A075B654 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Trav3-4A0A075B654 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-4A0A075B654 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-4A0A075B654 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-4A0A075B654 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Trav3-4A0A075B654 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-4A0A075B654 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav3-4A0A075B654 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-4A0A075B654 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav3-4A0A075B654 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav3-4A0A075B654 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-4A0A075B654 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-4A0A075B654 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav3-4A0A075B654 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-4A0A075B654 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-4A0A075B654 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-4A0A075B654 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-4A0A075B654 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav3-4A0A075B654 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-4A0A075B654 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-4A0A075B654 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-4A0A075B654 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-4A0A075B654 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-4A0A075B654 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav3-4A0A075B654 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14□□□□□ -0.17
Trav3-4A0A075B654 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-4A0A075B654 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-4A0A075B654 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav3-4A0A075B654 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-4A0A075B654 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-4A0A075B654 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-4A0A075B654 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-4A0A075B654 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-4A0A075B654 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-4A0A075B654 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav3-4A0A075B654 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-4A0A075B654 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Trav3-4A0A075B654 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav3-4A0A075B654 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-4A0A075B654 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav3-4A0A075B654 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-4A0A075B654 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-4A0A075B654 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav3-4A0A075B654 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav3-4A0A075B654 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-4A0A075B654 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav3-4A0A075B654 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav3-4A0A075B654 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav3-4A0A075B654 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav3-4A0A075B654 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-4A0A075B654 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-4A0A075B654 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-4A0A075B654 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-4A0A075B654 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-4A0A075B654 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-4A0A075B654 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-4A0A075B654 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-4A0A075B654 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-4A0A075B654 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-4A0A075B654 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav3-4A0A075B654 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC13.96□□□□□ -0.18
Trav3-4A0A075B654 Golph3-202ENSMUST00000226517 2359 ntBASIC13.96□□□□□ -0.18
Trav3-4A0A075B654 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav3-4A0A075B654 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav3-4A0A075B654 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav3-4A0A075B654 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav3-4A0A075B654 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Gm24804-201ENSMUST00000174982 85 ntBASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-4A0A075B654 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms