Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13-1A0A075B644 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Trav13-1A0A075B644 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav13-1A0A075B644 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav13-1A0A075B644 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav13-1A0A075B644 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13-1A0A075B644 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav13-1A0A075B644 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13-1A0A075B644 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13-1A0A075B644 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13-1A0A075B644 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13-1A0A075B644 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13-1A0A075B644 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13-1A0A075B644 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.77□□□□□ -0.04
Trav13-1A0A075B644 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13-1A0A075B644 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13-1A0A075B644 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13-1A0A075B644 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav13-1A0A075B644 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav13-1A0A075B644 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav13-1A0A075B644 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13-1A0A075B644 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13-1A0A075B644 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13-1A0A075B644 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav13-1A0A075B644 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13-1A0A075B644 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Gm40881-201ENSMUST00000223397 166 ntBASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Trav13-1A0A075B644 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-1A0A075B644 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-1A0A075B644 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-1A0A075B644 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-1A0A075B644 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-1A0A075B644 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav13-1A0A075B644 Gm10399-202ENSMUST00000202768 748 ntBASIC14.75□□□□□ -0.05
Trav13-1A0A075B644 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-1A0A075B644 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-1A0A075B644 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13-1A0A075B644 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.75□□□□□ -0.05
Trav13-1A0A075B644 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav13-1A0A075B644 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13-1A0A075B644 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13-1A0A075B644 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13-1A0A075B644 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13-1A0A075B644 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13-1A0A075B644 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav13-1A0A075B644 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13-1A0A075B644 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13-1A0A075B644 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13-1A0A075B644 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.73□□□□□ -0.05
Trav13-1A0A075B644 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13-1A0A075B644 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13-1A0A075B644 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13-1A0A075B644 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav13-1A0A075B644 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13-1A0A075B644 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav13-1A0A075B644 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13-1A0A075B644 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13-1A0A075B644 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav13-1A0A075B644 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-1A0A075B644 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-1A0A075B644 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-1A0A075B644 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-1A0A075B644 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav13-1A0A075B644 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-1A0A075B644 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-1A0A075B644 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-1A0A075B644 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-1A0A075B644 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-1A0A075B644 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-1A0A075B644 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-1A0A075B644 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav13-1A0A075B644 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-1A0A075B644 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.71□□□□□ -0.05
Trav13-1A0A075B644 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.71□□□□□ -0.05
Trav13-1A0A075B644 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms