Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.75■□□□□ 0.11
Trav16nA0A075B634 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16nA0A075B634 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16nA0A075B634 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trav16nA0A075B634 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16nA0A075B634 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Trav16nA0A075B634 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.74■□□□□ 0.11
Trav16nA0A075B634 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16nA0A075B634 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16nA0A075B634 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16nA0A075B634 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16nA0A075B634 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav16nA0A075B634 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav16nA0A075B634 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16nA0A075B634 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.73■□□□□ 0.11
Trav16nA0A075B634 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16nA0A075B634 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16nA0A075B634 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16nA0A075B634 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
Trav16nA0A075B634 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav16nA0A075B634 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav16nA0A075B634 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav16nA0A075B634 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16nA0A075B634 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16nA0A075B634 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16nA0A075B634 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav16nA0A075B634 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav16nA0A075B634 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16nA0A075B634 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav16nA0A075B634 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav16nA0A075B634 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16nA0A075B634 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16nA0A075B634 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16nA0A075B634 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16nA0A075B634 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16nA0A075B634 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16nA0A075B634 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.7■□□□□ 0.1
Trav16nA0A075B634 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16nA0A075B634 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16nA0A075B634 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16nA0A075B634 Iqck-206ENSMUST00000208658 2891 ntBASIC15.69■□□□□ 0.1
Trav16nA0A075B634 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16nA0A075B634 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16nA0A075B634 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16nA0A075B634 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16nA0A075B634 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16nA0A075B634 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16nA0A075B634 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16nA0A075B634 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16nA0A075B634 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16nA0A075B634 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav16nA0A075B634 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16nA0A075B634 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav16nA0A075B634 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16nA0A075B634 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.68■□□□□ 0.1
Trav16nA0A075B634 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav16nA0A075B634 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16nA0A075B634 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16nA0A075B634 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16nA0A075B634 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16nA0A075B634 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16nA0A075B634 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16nA0A075B634 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16nA0A075B634 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav16nA0A075B634 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav16nA0A075B634 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16nA0A075B634 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16nA0A075B634 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16nA0A075B634 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16nA0A075B634 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav16nA0A075B634 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.65■□□□□ 0.1
Trav16nA0A075B634 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms