Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16d-dv11A0A075B617 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav16d-dv11A0A075B617 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16d-dv11A0A075B617 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav16d-dv11A0A075B617 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16d-dv11A0A075B617 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16d-dv11A0A075B617 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.3■□□□□ 0.04
Trav16d-dv11A0A075B617 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16d-dv11A0A075B617 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16d-dv11A0A075B617 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16d-dv11A0A075B617 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trav16d-dv11A0A075B617 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16d-dv11A0A075B617 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav16d-dv11A0A075B617 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav16d-dv11A0A075B617 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav16d-dv11A0A075B617 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav16d-dv11A0A075B617 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav16d-dv11A0A075B617 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav16d-dv11A0A075B617 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Trav16d-dv11A0A075B617 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16d-dv11A0A075B617 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16d-dv11A0A075B617 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16d-dv11A0A075B617 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16d-dv11A0A075B617 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16d-dv11A0A075B617 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16d-dv11A0A075B617 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16d-dv11A0A075B617 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16d-dv11A0A075B617 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Trav16d-dv11A0A075B617 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16d-dv11A0A075B617 Terc-201ENSMUST00000082862 423 ntBASIC15.26■□□□□ 0.03
Trav16d-dv11A0A075B617 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav16d-dv11A0A075B617 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16d-dv11A0A075B617 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16d-dv11A0A075B617 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16d-dv11A0A075B617 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16d-dv11A0A075B617 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav16d-dv11A0A075B617 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16d-dv11A0A075B617 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav16d-dv11A0A075B617 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav16d-dv11A0A075B617 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav16d-dv11A0A075B617 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16d-dv11A0A075B617 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav16d-dv11A0A075B617 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav16d-dv11A0A075B617 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.22■□□□□ 0.03
Trav16d-dv11A0A075B617 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav16d-dv11A0A075B617 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav16d-dv11A0A075B617 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav16d-dv11A0A075B617 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav16d-dv11A0A075B617 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav16d-dv11A0A075B617 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms