Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4n-4A0A075B615 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4n-4A0A075B615 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav4n-4A0A075B615 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav4n-4A0A075B615 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav4n-4A0A075B615 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4n-4A0A075B615 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Trav4n-4A0A075B615 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav4n-4A0A075B615 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4n-4A0A075B615 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4n-4A0A075B615 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.49□□□□□ -0.09
Trav4n-4A0A075B615 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4n-4A0A075B615 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4n-4A0A075B615 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.49□□□□□ -0.09
Trav4n-4A0A075B615 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4n-4A0A075B615 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4n-4A0A075B615 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trav4n-4A0A075B615 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4n-4A0A075B615 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4n-4A0A075B615 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4n-4A0A075B615 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4n-4A0A075B615 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav4n-4A0A075B615 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4n-4A0A075B615 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4n-4A0A075B615 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4n-4A0A075B615 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav4n-4A0A075B615 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4n-4A0A075B615 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav4n-4A0A075B615 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4n-4A0A075B615 Gm24804-201ENSMUST00000174982 85 ntBASIC14.46□□□□□ -0.09
Trav4n-4A0A075B615 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4n-4A0A075B615 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Trav4n-4A0A075B615 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4n-4A0A075B615 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4n-4A0A075B615 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav4n-4A0A075B615 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav4n-4A0A075B615 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav4n-4A0A075B615 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav4n-4A0A075B615 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4n-4A0A075B615 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav4n-4A0A075B615 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4n-4A0A075B615 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Trav4n-4A0A075B615 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4n-4A0A075B615 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav4n-4A0A075B615 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4n-4A0A075B615 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4n-4A0A075B615 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav4n-4A0A075B615 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Gm24970-201ENSMUST00000175582 82 ntBASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.44□□□□□ -0.1
Trav4n-4A0A075B615 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4n-4A0A075B615 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms