Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9-1A0A075B601 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav9-1A0A075B601 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Trav9-1A0A075B601 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-1A0A075B601 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav9-1A0A075B601 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Trav9-1A0A075B601 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-1A0A075B601 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav9-1A0A075B601 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav9-1A0A075B601 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-1A0A075B601 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-1A0A075B601 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-1A0A075B601 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-1A0A075B601 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav9-1A0A075B601 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.27■□□□□ 0.19
Trav9-1A0A075B601 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav9-1A0A075B601 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav9-1A0A075B601 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9-1A0A075B601 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
Trav9-1A0A075B601 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9-1A0A075B601 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav9-1A0A075B601 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9-1A0A075B601 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Trav9-1A0A075B601 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9-1A0A075B601 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9-1A0A075B601 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9-1A0A075B601 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9-1A0A075B601 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Trav9-1A0A075B601 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav9-1A0A075B601 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9-1A0A075B601 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9-1A0A075B601 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav9-1A0A075B601 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav9-1A0A075B601 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav9-1A0A075B601 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9-1A0A075B601 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Gm10420-201ENSMUST00000121713 882 ntBASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-1A0A075B601 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav9-1A0A075B601 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav9-1A0A075B601 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-1A0A075B601 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-1A0A075B601 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav9-1A0A075B601 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-1A0A075B601 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-1A0A075B601 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-1A0A075B601 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-1A0A075B601 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-1A0A075B601 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav9-1A0A075B601 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-1A0A075B601 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9-1A0A075B601 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9-1A0A075B601 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9-1A0A075B601 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9-1A0A075B601 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav9-1A0A075B601 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9-1A0A075B601 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9-1A0A075B601 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9-1A0A075B601 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav9-1A0A075B601 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9-1A0A075B601 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms