Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav1A0A075B5Z4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav1A0A075B5Z4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav1A0A075B5Z4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav1A0A075B5Z4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.5■□□□□ 0.71
Trav1A0A075B5Z4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trav1A0A075B5Z4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav1A0A075B5Z4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Trav1A0A075B5Z4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav1A0A075B5Z4 Cap2-205ENSMUST00000225824 1634 ntBASIC19.48■□□□□ 0.71
Trav1A0A075B5Z4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav1A0A075B5Z4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav1A0A075B5Z4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav1A0A075B5Z4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav1A0A075B5Z4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav1A0A075B5Z4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav1A0A075B5Z4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav1A0A075B5Z4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav1A0A075B5Z4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav1A0A075B5Z4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav1A0A075B5Z4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav1A0A075B5Z4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav1A0A075B5Z4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav1A0A075B5Z4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav1A0A075B5Z4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav1A0A075B5Z4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav1A0A075B5Z4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav1A0A075B5Z4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trav1A0A075B5Z4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav1A0A075B5Z4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav1A0A075B5Z4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav1A0A075B5Z4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav1A0A075B5Z4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav1A0A075B5Z4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trav1A0A075B5Z4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
Trav1A0A075B5Z4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav1A0A075B5Z4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Trav1A0A075B5Z4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.45■□□□□ 0.7
Trav1A0A075B5Z4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Trav1A0A075B5Z4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.45■□□□□ 0.7
Trav1A0A075B5Z4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trav1A0A075B5Z4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.45■□□□□ 0.7
Trav1A0A075B5Z4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.45■□□□□ 0.7
Trav1A0A075B5Z4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Trav1A0A075B5Z4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav1A0A075B5Z4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.45■□□□□ 0.7
Trav1A0A075B5Z4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav1A0A075B5Z4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav1A0A075B5Z4 Gm45444-201ENSMUST00000211394 898 ntBASIC19.44■□□□□ 0.7
Trav1A0A075B5Z4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.44■□□□□ 0.7
Trav1A0A075B5Z4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.44■□□□□ 0.7
Trav1A0A075B5Z4 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.44■□□□□ 0.7
Trav1A0A075B5Z4 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.44■□□□□ 0.7
Trav1A0A075B5Z4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav1A0A075B5Z4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav1A0A075B5Z4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav1A0A075B5Z4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.44■□□□□ 0.7
Trav1A0A075B5Z4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav1A0A075B5Z4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav1A0A075B5Z4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Trav1A0A075B5Z4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav1A0A075B5Z4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav1A0A075B5Z4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav1A0A075B5Z4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav1A0A075B5Z4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav1A0A075B5Z4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav1A0A075B5Z4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav1A0A075B5Z4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav1A0A075B5Z4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav1A0A075B5Z4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav1A0A075B5Z4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav1A0A075B5Z4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.41■□□□□ 0.7
Trav1A0A075B5Z4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav1A0A075B5Z4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav1A0A075B5Z4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav1A0A075B5Z4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms