Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Gm11814-201ENSMUST00000119515 929 ntBASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Gm27486-201ENSMUST00000184923 80 ntBASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Gm27892-201ENSMUST00000185017 106 ntBASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Gm4768-201ENSMUST00000206199 686 ntBASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Gm10146-201ENSMUST00000072739 309 ntBASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb3S4R1G7 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.23□□□□□ -0.61
H2afb3S4R1G7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H2afb3S4R1G7 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms