Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crlf3Q9Z2L7 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Gm8602-201ENSMUST00000184045 607 ntBASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Gm43433-201ENSMUST00000196573 481 ntBASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Gm16372-201ENSMUST00000073088 450 ntBASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.6□□□□□ -0.39
Crlf3Q9Z2L7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Gm5687-201ENSMUST00000118252 640 ntBASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Gm15806-201ENSMUST00000120696 955 ntBASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Gm44397-201ENSMUST00000195950 113 ntBASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Gm6983-201ENSMUST00000214912 628 ntBASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Gm8227-201ENSMUST00000223306 571 ntBASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crlf3Q9Z2L7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Crlf3Q9Z2L7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Crlf3Q9Z2L7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms