Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Phf1Q9Z1B8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Gm11964-201ENSMUST00000120982 444 ntBASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phf1Q9Z1B8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Gm26461-201ENSMUST00000175064 290 ntBASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phf1Q9Z1B8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms