Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Mir3102-201ENSMUST00000175555 104 ntBASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Gm45224-201ENSMUST00000208203 414 ntBASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm11989-201ENSMUST00000117240 672 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm11362-201ENSMUST00000118838 850 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm27627-201ENSMUST00000183644 150 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm29615-201ENSMUST00000185371 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm28224-201ENSMUST00000186078 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm29001-201ENSMUST00000186177 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm28292-201ENSMUST00000186593 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm28101-201ENSMUST00000187608 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm29076-201ENSMUST00000187689 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm28302-201ENSMUST00000187931 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm28646-201ENSMUST00000188220 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm28205-201ENSMUST00000189177 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm29032-201ENSMUST00000189797 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm28695-201ENSMUST00000190300 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm37448-201ENSMUST00000192795 697 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 AY036118-201ENSMUST00000200021 923 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcb1Q9Z0H3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcb1Q9Z0H3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms