Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Scn8aQ9WTU3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn8aQ9WTU3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm16505-201ENSMUST00000179981 232 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm5369-201ENSMUST00000217499 588 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm12196-201ENSMUST00000120954 262 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm5706-201ENSMUST00000181525 993 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm27627-201ENSMUST00000183644 150 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm29615-201ENSMUST00000185371 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm28224-201ENSMUST00000186078 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm29001-201ENSMUST00000186177 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm28292-201ENSMUST00000186593 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm28101-201ENSMUST00000187608 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm29076-201ENSMUST00000187689 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm28302-201ENSMUST00000187931 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm28646-201ENSMUST00000188220 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm28205-201ENSMUST00000189177 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm29032-201ENSMUST00000189797 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm28695-201ENSMUST00000190300 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gm37448-201ENSMUST00000192795 697 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Scn8aQ9WTU3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms