Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm11478-201ENSMUST00000117851 599 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm11978-201ENSMUST00000122315 466 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Mir1894-201ENSMUST00000122802 81 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Proscos-202ENSMUST00000178990 666 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm27892-201ENSMUST00000185017 106 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm7063-201ENSMUST00000186840 981 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm5244-202ENSMUST00000189517 743 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim39Q9ESN2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.72□□□□□ -0.53
Trim39Q9ESN2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim39Q9ESN2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms