Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
OtofQ9ESF1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Gm13408-201ENSMUST00000119822 798 ntBASIC12.29□□□□□ -0.44
OtofQ9ESF1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Gm13935-201ENSMUST00000121859 798 ntBASIC12.29□□□□□ -0.44
OtofQ9ESF1 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.29□□□□□ -0.44
OtofQ9ESF1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.29□□□□□ -0.44
OtofQ9ESF1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Gm25881-201ENSMUST00000157783 103 ntBASIC12.29□□□□□ -0.44
OtofQ9ESF1 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Gm4034-201ENSMUST00000187674 480 ntBASIC12.29□□□□□ -0.44
OtofQ9ESF1 Gm37986-201ENSMUST00000193285 383 ntBASIC12.29□□□□□ -0.44
OtofQ9ESF1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
OtofQ9ESF1 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.28□□□□□ -0.44
OtofQ9ESF1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.28□□□□□ -0.44
OtofQ9ESF1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Mir1943-201ENSMUST00000158276 73 ntBASIC12.28□□□□□ -0.44
OtofQ9ESF1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Gm17391-201ENSMUST00000171036 126 ntBASIC12.28□□□□□ -0.44
OtofQ9ESF1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.28□□□□□ -0.44
OtofQ9ESF1 Gm7467-201ENSMUST00000185173 652 ntBASIC12.28□□□□□ -0.44
OtofQ9ESF1 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
OtofQ9ESF1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
OtofQ9ESF1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
OtofQ9ESF1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
OtofQ9ESF1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
OtofQ9ESF1 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
OtofQ9ESF1 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.27□□□□□ -0.44
OtofQ9ESF1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
OtofQ9ESF1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
OtofQ9ESF1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
OtofQ9ESF1 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.27□□□□□ -0.44
OtofQ9ESF1 Gm11509-201ENSMUST00000117358 325 ntBASIC12.27□□□□□ -0.44
OtofQ9ESF1 Gm13035-201ENSMUST00000117496 342 ntBASIC12.27□□□□□ -0.44
OtofQ9ESF1 Gm12501-201ENSMUST00000119163 529 ntBASIC12.27□□□□□ -0.44
OtofQ9ESF1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.27□□□□□ -0.44
OtofQ9ESF1 Gm11941-201ENSMUST00000119904 610 ntBASIC12.27□□□□□ -0.44
OtofQ9ESF1 Gm12164-201ENSMUST00000121695 551 ntBASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms