Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Gm11478-201ENSMUST00000117851 599 ntBASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Gm13369-201ENSMUST00000119442 987 ntBASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Gm11814-201ENSMUST00000119515 929 ntBASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Gm11424-201ENSMUST00000121929 829 ntBASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Gm37922-201ENSMUST00000195596 455 ntBASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc130Q9D516 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Gm27486-201ENSMUST00000184923 80 ntBASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Gm7063-201ENSMUST00000186840 981 ntBASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.57□□□□□ -0.4
Ccdc130Q9D516 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.57□□□□□ -0.4
Ccdc130Q9D516 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc130Q9D516 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc130Q9D516 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms