Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Stag1Q9D3E6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stag1Q9D3E6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stag1Q9D3E6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Stag1Q9D3E6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stag1Q9D3E6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stag1Q9D3E6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Stag1Q9D3E6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stag1Q9D3E6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.86□□□□□ -0.03
Stag1Q9D3E6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Gm27627-201ENSMUST00000183644 150 ntBASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Gm43378-201ENSMUST00000199336 582 ntBASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stag1Q9D3E6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Gm11331-201ENSMUST00000119764 288 ntBASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 AY036118-201ENSMUST00000200021 923 ntBASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Gm44958-201ENSMUST00000203734 736 ntBASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Gm19994-201ENSMUST00000217086 586 ntBASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.84□□□□□ -0.03
Stag1Q9D3E6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stag1Q9D3E6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Stag1Q9D3E6 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.83□□□□□ -0.03
Stag1Q9D3E6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Stag1Q9D3E6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Stag1Q9D3E6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Stag1Q9D3E6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Stag1Q9D3E6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Stag1Q9D3E6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Stag1Q9D3E6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Stag1Q9D3E6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Stag1Q9D3E6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Gm12380-201ENSMUST00000119012 544 ntBASIC14.83□□□□□ -0.04
Stag1Q9D3E6 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Stag1Q9D3E6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms