Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Gm8515-201ENSMUST00000194852 576 ntBASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Gm6180-201ENSMUST00000065243 498 ntBASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.83□□□□□ -0.36
Snf8Q9CZ28 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snf8Q9CZ28 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm28911-201ENSMUST00000188837 117 ntBASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm7287-201ENSMUST00000205267 602 ntBASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.82□□□□□ -0.36
Snf8Q9CZ28 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Rmrp-201ENSMUST00000157463 271 ntBASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Gm37497-201ENSMUST00000195830 798 ntBASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.81□□□□□ -0.36
Snf8Q9CZ28 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snf8Q9CZ28 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 273.8 ms