Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Gm16215-201ENSMUST00000161990 637 ntBASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Gm32025-201ENSMUST00000217960 307 ntBASIC12.36□□□□□ -0.43
Ssu72Q9CY97 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.36□□□□□ -0.43
Ssu72Q9CY97 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.36□□□□□ -0.43
Ssu72Q9CY97 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.35□□□□□ -0.43
Ssu72Q9CY97 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm23119-201ENSMUST00000158610 140 ntBASIC12.35□□□□□ -0.43
Ssu72Q9CY97 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm37497-201ENSMUST00000195830 798 ntBASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm20949-201ENSMUST00000206478 952 ntBASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssu72Q9CY97 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms