Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldnd1Q9CQX5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gm12899-201ENSMUST00000120565 551 ntBASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gm42518-201ENSMUST00000196277 938 ntBASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldnd1Q9CQX5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Gm24231-201ENSMUST00000104315 133 ntBASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Gm17889-201ENSMUST00000198410 598 ntBASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cldnd1Q9CQX5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.71□□□□□ -0.38
Cldnd1Q9CQX5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms