Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Gm9022-201ENSMUST00000182482 992 ntBASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Gm18304-201ENSMUST00000189162 546 ntBASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Rprl1-202ENSMUST00000198476 238 ntBASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Gm44958-201ENSMUST00000203734 736 ntBASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.59□□□□□ -0.39
Lsm7Q9CQQ8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lsm7Q9CQQ8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lsm7Q9CQQ8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Gm13296-201ENSMUST00000117854 997 ntBASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Gm16570-201ENSMUST00000161951 436 ntBASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lsm7Q9CQQ8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms