Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.45□□□□□ -0.42
Trim33Q99PP7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.45□□□□□ -0.42
Trim33Q99PP7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Gm16379-201ENSMUST00000161469 348 ntBASIC12.45□□□□□ -0.42
Trim33Q99PP7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Gm8762-201ENSMUST00000193486 339 ntBASIC12.45□□□□□ -0.42
Trim33Q99PP7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.45□□□□□ -0.42
Trim33Q99PP7 AC173482.3-201ENSMUST00000225492 1212 ntBASIC12.45□□□□□ -0.42
Trim33Q99PP7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.45□□□□□ -0.42
Trim33Q99PP7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.44□□□□□ -0.42
Trim33Q99PP7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.44□□□□□ -0.42
Trim33Q99PP7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Gm22018-201ENSMUST00000104357 131 ntBASIC12.44□□□□□ -0.42
Trim33Q99PP7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Gm12742-201ENSMUST00000117326 410 ntBASIC12.44□□□□□ -0.42
Trim33Q99PP7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.44□□□□□ -0.42
Trim33Q99PP7 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Gm8062-201ENSMUST00000139696 444 ntBASIC12.44□□□□□ -0.42
Trim33Q99PP7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Gm7809-201ENSMUST00000153199 742 ntBASIC12.44□□□□□ -0.42
Trim33Q99PP7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim33Q99PP7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim33Q99PP7 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim33Q99PP7 Gm5187-201ENSMUST00000117317 991 ntBASIC12.43□□□□□ -0.42
Trim33Q99PP7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms