Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trim34aQ99PP6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trim34aQ99PP6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim34aQ99PP6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
Trim34aQ99PP6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Gm13045-201ENSMUST00000119019 712 ntBASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Gm15432-201ENSMUST00000121106 195 ntBASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Gm5455-201ENSMUST00000058710 715 ntBASIC15.33■□□□□ 0.04
Trim34aQ99PP6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim34aQ99PP6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm12165-201ENSMUST00000117047 342 ntBASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm11941-201ENSMUST00000119904 610 ntBASIC15.32■□□□□ 0.04
Trim34aQ99PP6 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm25881-201ENSMUST00000157783 103 ntBASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm45770-201ENSMUST00000212105 616 ntBASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim34aQ99PP6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.32■□□□□ 0.04
Trim34aQ99PP6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms