Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 AC125409.1-201ENSMUST00000223213 3370 ntBASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gtf2a1Q99PM3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Gtf2a1Q99PM3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gtf2a1Q99PM3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Gtf2a1Q99PM3 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Gm15372-201ENSMUST00000120729 834 ntBASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gtf2a1Q99PM3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gtf2a1Q99PM3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms