Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Gm42627-201ENSMUST00000197347 224 ntBASIC12.16□□□□□ -0.46
Msh4Q99MT2 Gm18584-201ENSMUST00000203098 964 ntBASIC12.16□□□□□ -0.46
Msh4Q99MT2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.16□□□□□ -0.46
Msh4Q99MT2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Msh4Q99MT2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.15□□□□□ -0.46
Msh4Q99MT2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Gm6023-201ENSMUST00000118217 606 ntBASIC12.15□□□□□ -0.46
Msh4Q99MT2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.15□□□□□ -0.46
Msh4Q99MT2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msh4Q99MT2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Msh4Q99MT2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Msh4Q99MT2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.14□□□□□ -0.47
Msh4Q99MT2 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.14□□□□□ -0.47
Msh4Q99MT2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.14□□□□□ -0.47
Msh4Q99MT2 Gm27501-201ENSMUST00000183599 107 ntBASIC12.14□□□□□ -0.47
Msh4Q99MT2 Gm43179-201ENSMUST00000198797 275 ntBASIC12.14□□□□□ -0.47
Msh4Q99MT2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Gm8099-201ENSMUST00000200510 742 ntBASIC12.14□□□□□ -0.47
Msh4Q99MT2 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.14□□□□□ -0.47
Msh4Q99MT2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.14□□□□□ -0.47
Msh4Q99MT2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.14□□□□□ -0.47
Msh4Q99MT2 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.14□□□□□ -0.47
Msh4Q99MT2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.14□□□□□ -0.47
Msh4Q99MT2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Msh4Q99MT2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Msh4Q99MT2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msh4Q99MT2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.13□□□□□ -0.47
Msh4Q99MT2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msh4Q99MT2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msh4Q99MT2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msh4Q99MT2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msh4Q99MT2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msh4Q99MT2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms