Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Gm4726-201ENSMUST00000135604 736 ntBASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Gm6019-201ENSMUST00000148369 736 ntBASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Gm5733-201ENSMUST00000190232 939 ntBASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Gm4482-201ENSMUST00000200876 742 ntBASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Gm40879-201ENSMUST00000220759 612 ntBASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Gm26989-201ENSMUST00000182608 749 ntBASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col25a1Q99MQ5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col25a1Q99MQ5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms