Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Gm4271-201ENSMUST00000174444 973 ntBASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Gm38092-201ENSMUST00000195600 653 ntBASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Gm29705-201ENSMUST00000212598 474 ntBASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdk5rap3Q99LM2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Gm12138-201ENSMUST00000122180 951 ntBASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Gm24644-201ENSMUST00000157114 139 ntBASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Rmrp-201ENSMUST00000157463 271 ntBASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Gm9002-201ENSMUST00000178437 499 ntBASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Gm27486-201ENSMUST00000184923 80 ntBASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdk5rap3Q99LM2 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms