Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Lysmd3Q99LE3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Lysmd3Q99LE3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Gm14109-201ENSMUST00000118814 309 ntBASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Gm9022-201ENSMUST00000182482 992 ntBASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Gm28882-201ENSMUST00000185504 314 ntBASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Gm13097-201ENSMUST00000210722 397 ntBASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lysmd3Q99LE3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Gm15276-201ENSMUST00000145953 498 ntBASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Gm8885-201ENSMUST00000189382 598 ntBASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 AA914427-201ENSMUST00000193194 1166 ntBASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Gm38317-201ENSMUST00000195564 343 ntBASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Gm44967-201ENSMUST00000207047 631 ntBASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Rubie-203ENSMUST00000227803 2430 ntBASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lysmd3Q99LE3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lysmd3Q99LE3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Lysmd3Q99LE3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd3Q99LE3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd3Q99LE3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd3Q99LE3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lysmd3Q99LE3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd3Q99LE3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd3Q99LE3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd3Q99LE3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd3Q99LE3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.93□□□□□ -0.34
Lysmd3Q99LE3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms