Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Gm23200-201ENSMUST00000104379 132 ntBASIC14.42□□□□□ -0.1
Smc1bQ920F6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Gm45118-201ENSMUST00000208928 825 ntBASIC14.42□□□□□ -0.1
Smc1bQ920F6 Gm6458-201ENSMUST00000211573 635 ntBASIC14.42□□□□□ -0.1
Smc1bQ920F6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.42□□□□□ -0.1
Smc1bQ920F6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smc1bQ920F6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc1bQ920F6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.41□□□□□ -0.1
Smc1bQ920F6 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.41□□□□□ -0.1
Smc1bQ920F6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Gm5904-201ENSMUST00000210286 865 ntBASIC14.41□□□□□ -0.1
Smc1bQ920F6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.41□□□□□ -0.1
Smc1bQ920F6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.41□□□□□ -0.1
Smc1bQ920F6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smc1bQ920F6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.41□□□□□ -0.1
Smc1bQ920F6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc1bQ920F6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms