Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gm24644-201ENSMUST00000157114 139 ntBASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gm27839-201ENSMUST00000184242 106 ntBASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gm29705-201ENSMUST00000212598 474 ntBASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gm5035-201ENSMUST00000215581 927 ntBASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb4Q91XZ6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Gm7561-201ENSMUST00000211203 886 ntBASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb4Q91XZ6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Snord83b-201ENSMUST00000104546 94 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm11478-201ENSMUST00000117851 599 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm4271-201ENSMUST00000174444 973 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm4768-201ENSMUST00000206199 686 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm7653-201ENSMUST00000214567 508 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm19163-201ENSMUST00000223313 780 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms