Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gm9797-201ENSMUST00000052902 613 ntBASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Gm16202-201ENSMUST00000117532 544 ntBASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Gm20949-201ENSMUST00000206478 952 ntBASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Gm45359-201ENSMUST00000210635 427 ntBASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Gm20445-201ENSMUST00000061905 565 ntBASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa1Q8VEE4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Cog3-203ENSMUST00000227473 4197 ntBASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Gm13689-201ENSMUST00000119360 685 ntBASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Gm35960-201ENSMUST00000202712 767 ntBASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa1Q8VEE4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms