Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gm11222-201ENSMUST00000119005 738 ntBASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Gm11597-201ENSMUST00000121423 964 ntBASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Gm7783-201ENSMUST00000204795 781 ntBASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Gm30285-201ENSMUST00000214614 422 ntBASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rprd1aQ8VDS4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Gm21769-201ENSMUST00000211922 111 ntBASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Gm5950-201ENSMUST00000213337 772 ntBASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rprd1aQ8VDS4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Gm7584-201ENSMUST00000175829 940 ntBASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms