Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Gm18584-201ENSMUST00000203098 964 ntBASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Swsap1Q8VCI7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm12291-201ENSMUST00000121627 311 ntBASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm7809-201ENSMUST00000153199 742 ntBASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm29396-201ENSMUST00000185659 716 ntBASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Olfr284-202ENSMUST00000206647 966 ntBASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm5904-201ENSMUST00000210286 865 ntBASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm10608-202ENSMUST00000213924 676 ntBASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm9368-201ENSMUST00000219348 831 ntBASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Swsap1Q8VCI7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Swsap1Q8VCI7 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms