Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm24830-201ENSMUST00000102024 166 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm25890-201ENSMUST00000177643 165 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm22614-201ENSMUST00000178300 165 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm2383-201ENSMUST00000181461 807 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm22042-201ENSMUST00000082989 165 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm26232-201ENSMUST00000083360 166 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm24136-201ENSMUST00000083374 165 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Gm26110-201ENSMUST00000083971 165 ntBASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ndc1Q8VCB1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Gm13736-201ENSMUST00000119272 253 ntBASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Gm25043-201ENSMUST00000158604 212 ntBASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Gm16296-201ENSMUST00000159905 325 ntBASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ndc1Q8VCB1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ndc1Q8VCB1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.52
Ndc1Q8VCB1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ndc1Q8VCB1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ndc1Q8VCB1 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms